Bug#948325: marked as done (ITP: libbio-featureio-perl -- Modules for reading, writing, and manipulating sequence features)
Your message dated Sun, 12 Jan 2020 22:05:01 +0000
with message-id <E1iqlLx-0003Ug-TZ@fasolo.debian.org>
and subject line Bug#948325: fixed in libbio-featureio-perl 1.6.905-1
has caused the Debian Bug report #948325,
regarding ITP: libbio-featureio-perl -- Modules for reading, writing, and manipulating sequence features
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
948325: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=948325
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--- Begin Message ---
Package: wnpp
Severity: wishlist
Subject: ITP: libbio-featureio-perl -- Modules for reading, writing, and manipulating sequence features
Package: wnpp
Owner: Michael R. Crusoe <michael.crusoe@gmail.com>
Severity: wishlist
* Package name : libbio-featureio-perl
Version : 1.6.905
Upstream Author : BioPerl Team <bioperl-l@bioperl.org>
* URL : https://metacpan.org/release/Bio-FeatureIO
* License : Artistic
Programming Lang: (C, C++, C#, Perl, Python, etc.)
Description : Modules for reading, writing, and manipulating sequence features
An I/O iterator subsystem for genomic sequence features.
.
Bio::FeatureIO is a handler module for the formats in the FeatureIO set (eg,
Bio::FeatureIO::GFF). It is the officially sanctioned way of getting at the
format objects, which most people should use.
.
The Bio::FeatureIO system can be thought of like biological file handles.
They are attached to filehandles with smart formatting rules (eg, GFF format,
or BED format) and can either read or write feature objects (Bio::SeqFeature
objects, or more correctly, Bio::FeatureHolderI implementing objects, of
which Bio::SeqFeature is one such object). If you want to know what to do
with a Bio::SeqFeatureI object, read Bio::SeqFeatureI.
.
The idea is that you request a stream object for a particular format. All the
stream objects have a notion of an internal file that is read from or written
to. A particular FeatureIO object instance is configured for either input or
output. A specific example of a stream object is the Bio::FeatureIO::gff
object.
Remark: This package is maintained by Debian Med Packaging Team at
https://salsa.debian.org/med-team/libbio-featureio-perl
--- End Message ---
--- Begin Message ---
Source: libbio-featureio-perl
Source-Version: 1.6.905-1
We believe that the bug you reported is fixed in the latest version of
libbio-featureio-perl, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 948325@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Michael R. Crusoe <michael.crusoe@gmail.com> (supplier of updated libbio-featureio-perl package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Tue, 7 Jan 2020 11:25:43 +0000
Source: libbio-featureio-perl
Binary: libbio-featureio-perl
Architecture: source all
Version: 1.6.905-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Michael R. Crusoe <michael.crusoe@gmail.com>
Description:
libbio-featureio-perl - Modules for reading, writing, and manipulating sequence features
Closes: 948325
Changes:
libbio-featureio-perl (1.6.905-1) unstable; urgency=low
.
* Initial release. (Closes: #948325)
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